Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atxn3Q9CVD2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Gm6091-201ENSMUST00000098307 165 ntBASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn3Q9CVD2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Gm11814-201ENSMUST00000119515 929 ntBASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Gm17150-201ENSMUST00000165577 381 ntBASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn3Q9CVD2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm12390-201ENSMUST00000117897 397 ntBASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm44069-201ENSMUST00000204898 506 ntBASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm17794-201ENSMUST00000220252 955 ntBASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn3Q9CVD2 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms