Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rubie-203ENSMUST00000227803 2430 ntBASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gm12341-201ENSMUST00000119724 503 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gm28911-201ENSMUST00000188837 117 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.96□□□□□ -0.01
Smc1aQ9CU62 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Smc1aQ9CU62 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc1aQ9CU62 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc1aQ9CU62 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.96□□□□□ -0.02
Smc1aQ9CU62 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.96□□□□□ -0.02
Smc1aQ9CU62 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smc1aQ9CU62 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm4984-201ENSMUST00000115987 360 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm8584-201ENSMUST00000171982 758 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm21470-201ENSMUST00000187680 696 ntBASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.94□□□□□ -0.02
Smc1aQ9CU62 Gm5035-201ENSMUST00000215581 927 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms