Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Gm5904-201ENSMUST00000210286 865 ntBASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldnd1Q9CQX5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cldnd1Q9CQX5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cldnd1Q9CQX5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.58□□□□□ -0.23
Cldnd1Q9CQX5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm15547-201ENSMUST00000122152 333 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm26361-201ENSMUST00000158868 186 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm44262-201ENSMUST00000204969 372 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cldnd1Q9CQX5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm9083-201ENSMUST00000120423 819 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Mir7032-201ENSMUST00000185154 79 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm8099-201ENSMUST00000200510 742 ntBASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cldnd1Q9CQX5 Gm8385-201ENSMUST00000058999 643 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms