Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Gm15483-201ENSMUST00000120338 456 ntBASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 AC149294.4-201ENSMUST00000227870 882 ntBASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39lQ9CQD0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Gm18856-201ENSMUST00000178096 1374 ntBASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 AA543401-201ENSMUST00000164248 1269 ntBASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rpl39lQ9CQD0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms