Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gm24158-201ENSMUST00000175263 71 ntBASIC13.11□□□□□ -0.31
Trim8Q99PJ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Syt7-205ENSMUST00000224135 1557 ntBASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gm13616-201ENSMUST00000120600 222 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.1□□□□□ -0.31
Trim8Q99PJ2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim8Q99PJ2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gm15920-201ENSMUST00000118998 402 ntBASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gm38294-201ENSMUST00000192831 381 ntBASIC13.09□□□□□ -0.31
Trim8Q99PJ2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.09□□□□□ -0.31
Trim8Q99PJ2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Trim8Q99PJ2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim8Q99PJ2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim8Q99PJ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim8Q99PJ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trim8Q99PJ2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms