Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm45550-201ENSMUST00000209380 946 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm17827-201ENSMUST00000211825 742 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm43962-201ENSMUST00000203898 190 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Gm1821-202ENSMUST00000227415 750 ntBASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh15Q99PJ1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm14058-201ENSMUST00000116082 735 ntBASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm7851-201ENSMUST00000117574 323 ntBASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm270-201ENSMUST00000223010 976 ntBASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm10076-201ENSMUST00000073238 384 ntBASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh15Q99PJ1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh15Q99PJ1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh15Q99PJ1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh15Q99PJ1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh15Q99PJ1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm28882-201ENSMUST00000185504 314 ntBASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm37246-201ENSMUST00000192665 835 ntBASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm12795-201ENSMUST00000117594 539 ntBASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Gm12899-201ENSMUST00000120565 551 ntBASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh15Q99PJ1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms