Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gm8927-201ENSMUST00000181978 981 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gm3222-201ENSMUST00000071282 990 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.97□□□□□ -0.33
Rnf111Q99ML9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf111Q99ML9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Mir698-201ENSMUST00000102164 109 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Gm13385-201ENSMUST00000121089 220 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Gm20949-201ENSMUST00000206478 952 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.96□□□□□ -0.33
Rnf111Q99ML9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf111Q99ML9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf111Q99ML9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf111Q99ML9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms