Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm14017-201ENSMUST00000121934 386 ntBASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkx6-1Q99MA9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm25890-201ENSMUST00000177643 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm22614-201ENSMUST00000178300 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm22042-201ENSMUST00000082989 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm24136-201ENSMUST00000083374 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm26110-201ENSMUST00000083971 165 ntBASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx6-1Q99MA9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx6-1Q99MA9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms