Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Gm7775-201ENSMUST00000218871 853 ntBASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk5rap3Q99LM2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk5rap3Q99LM2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm13223-201ENSMUST00000118609 747 ntBASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm9063-201ENSMUST00000223299 582 ntBASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap3Q99LM2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms