Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clcc1Q99LI2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm16177-201ENSMUST00000120728 718 ntBASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Snora78-201ENSMUST00000158630 128 ntBASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm17420-201ENSMUST00000164753 153 ntBASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clcc1Q99LI2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm27572-201ENSMUST00000183702 255 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm43818-201ENSMUST00000200605 466 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm10478-201ENSMUST00000084451 396 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.18□□□□□ -0.3
Clcc1Q99LI2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clcc1Q99LI2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Gm12203-201ENSMUST00000118235 598 ntBASIC13.17□□□□□ -0.3
Clcc1Q99LI2 Gm12209-201ENSMUST00000120089 596 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms