Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdk9Q99J95 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk9Q99J95 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.45□□□□□ -0.26
Cdk9Q99J95 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.45□□□□□ -0.26
Cdk9Q99J95 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.45□□□□□ -0.26
Cdk9Q99J95 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Gm13365-201ENSMUST00000121188 973 ntBASIC13.45□□□□□ -0.26
Cdk9Q99J95 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk9Q99J95 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.44□□□□□ -0.26
Cdk9Q99J95 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gm37714-201ENSMUST00000194742 342 ntBASIC13.44□□□□□ -0.26
Cdk9Q99J95 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.44□□□□□ -0.26
Cdk9Q99J95 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdk9Q99J95 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms