Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gm15198-201ENSMUST00000117283 177 ntBASIC15.71■□□□□ 0.11
Col20a1Q923P0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.71■□□□□ 0.11
Col20a1Q923P0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col20a1Q923P0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col20a1Q923P0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col20a1Q923P0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col20a1Q923P0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Gm16379-201ENSMUST00000161469 348 ntBASIC15.7■□□□□ 0.1
Col20a1Q923P0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Gm8762-201ENSMUST00000193486 339 ntBASIC15.7■□□□□ 0.1
Col20a1Q923P0 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.7■□□□□ 0.1
Col20a1Q923P0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.7■□□□□ 0.1
Col20a1Q923P0 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Mir6420-201ENSMUST00000185032 102 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm43118-201ENSMUST00000199149 775 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm9823-201ENSMUST00000051212 327 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.69■□□□□ 0.1
Col20a1Q923P0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col20a1Q923P0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms