Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha8Q91Y12 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha8Q91Y12 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Gm7730-201ENSMUST00000212486 454 ntBASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Rubie-203ENSMUST00000227803 2430 ntBASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha8Q91Y12 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm12485-201ENSMUST00000119641 291 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm5354-201ENSMUST00000182417 973 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Mir6977-201ENSMUST00000184960 64 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm42612-201ENSMUST00000197986 623 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm43170-201ENSMUST00000199827 612 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Gm17330-201ENSMUST00000221047 165 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha8Q91Y12 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Ldb3-207ENSMUST00000227819 1499 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm8775-201ENSMUST00000170943 1327 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm11524-201ENSMUST00000119349 807 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm43094-201ENSMUST00000196549 921 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms