Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm38671-201ENSMUST00000200573 130 ntBASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm17794-201ENSMUST00000220252 955 ntBASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Gm6244-201ENSMUST00000178732 841 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Gm7653-201ENSMUST00000214567 508 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Gm18041-201ENSMUST00000218210 618 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Gm5356-201ENSMUST00000093326 615 ntBASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha9Q91Y11 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Mir1894-201ENSMUST00000122802 81 ntBASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Gm27892-201ENSMUST00000185017 106 ntBASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha9Q91Y11 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms