Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gm15371-201ENSMUST00000117057 784 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gm11918-201ENSMUST00000121660 179 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gm27701-201ENSMUST00000184498 110 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga4Q91XY4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga4Q91XY4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms