Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Matn2-203ENSMUST00000226766 3252 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm11025-201ENSMUST00000140773 466 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm18057-201ENSMUST00000208220 503 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpa1Q8VEE4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.46□□□□□ -0.25
Rpa1Q8VEE4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rpa1Q8VEE4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms