Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gm14127-201ENSMUST00000117906 678 ntBASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Swsap1Q8VCI7 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Gm2445-201ENSMUST00000182798 989 ntBASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Swsap1Q8VCI7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Swsap1Q8VCI7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms