Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm24749-201ENSMUST00000157838 343 ntBASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm8194-201ENSMUST00000159783 859 ntBASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx54Q8K4L0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm11667-201ENSMUST00000119828 486 ntBASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm16397-201ENSMUST00000122201 494 ntBASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm25043-201ENSMUST00000158604 212 ntBASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm17040-202ENSMUST00000170597 889 ntBASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx54Q8K4L0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm13408-201ENSMUST00000119822 798 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm13935-201ENSMUST00000121859 798 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm45219-201ENSMUST00000205602 465 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms