Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shtn1Q8K2Q9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.71■□□□□ 0.1
Shtn1Q8K2Q9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm13316-201ENSMUST00000140537 691 ntBASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm27341-201ENSMUST00000183570 106 ntBASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm19163-201ENSMUST00000223313 780 ntBASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shtn1Q8K2Q9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gm22902-201ENSMUST00000158488 302 ntBASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Nsd1-205ENSMUST00000224693 852 ntBASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shtn1Q8K2Q9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm16202-201ENSMUST00000117532 544 ntBASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm11964-201ENSMUST00000120982 444 ntBASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shtn1Q8K2Q9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms