Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm12928-201ENSMUST00000117115 573 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm45841-201ENSMUST00000207700 164 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm8463-201ENSMUST00000208573 613 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtn1Q8K0T0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rtn1Q8K0T0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Gm12490-201ENSMUST00000120255 560 ntBASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn1Q8K0T0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms