Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm26185-201ENSMUST00000157692 266 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Mir7221-201ENSMUST00000184009 72 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab11fip3Q8CHD8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rab11fip3Q8CHD8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rab11fip3Q8CHD8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rab11fip3Q8CHD8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm22018-201ENSMUST00000104357 131 ntBASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm25261-201ENSMUST00000157416 134 ntBASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Gm19163-201ENSMUST00000223313 780 ntBASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab11fip3Q8CHD8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms