Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Gm9719-201ENSMUST00000162765 543 ntBASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Gm6916-202ENSMUST00000205523 195 ntBASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Matn2-203ENSMUST00000226766 3252 ntBASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28bQ8CEG5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28bQ8CEG5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm11745-201ENSMUST00000121669 448 ntBASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28bQ8CEG5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28bQ8CEG5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms