Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Gm7287-201ENSMUST00000205267 602 ntBASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Gm18473-201ENSMUST00000220543 868 ntBASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc60Q8C4J0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.02■□□□□ 0.31
Ccdc60Q8C4J0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc60Q8C4J0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc60Q8C4J0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm15806-201ENSMUST00000120696 955 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm6244-201ENSMUST00000178732 841 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm45841-201ENSMUST00000207700 164 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc60Q8C4J0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Abhd6-203ENSMUST00000225234 1958 ntBASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Gm5356-201ENSMUST00000093326 615 ntBASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Gm5989-201ENSMUST00000096092 2077 ntBASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc60Q8C4J0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc60Q8C4J0 Gm13612-201ENSMUST00000119276 390 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms