Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.49□□□□□ -0.41
Cpne1Q8C166 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.49□□□□□ -0.41
Cpne1Q8C166 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Cpne1Q8C166 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm15678-201ENSMUST00000117573 960 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm8515-201ENSMUST00000194852 576 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm6745-201ENSMUST00000199216 526 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm42550-201ENSMUST00000201553 960 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Gm9908-201ENSMUST00000211534 448 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.48□□□□□ -0.41
Cpne1Q8C166 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne1Q8C166 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne1Q8C166 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms