Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc44a2Q8BY89 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc44a2Q8BY89 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Slc44a2Q8BY89 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.01□□□□□ -0.33
Slc44a2Q8BY89 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slc44a2Q8BY89 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
Slc44a2Q8BY89 AC124732.2-201ENSMUST00000221977 316 ntBASIC13□□□□□ -0.33
Slc44a2Q8BY89 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13□□□□□ -0.33
Slc44a2Q8BY89 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm45453-201ENSMUST00000211758 853 ntBASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc44a2Q8BY89 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc44a2Q8BY89 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms