Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.54□□□□□ -0.24
Usp43Q8BUM9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp43Q8BUM9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Usp43Q8BUM9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Usp43Q8BUM9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp43Q8BUM9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms