Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Gm28631-201ENSMUST00000190740 334 ntBASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4Q8BQZ5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4Q8BQZ5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm6912-201ENSMUST00000117218 544 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm13385-201ENSMUST00000121089 220 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm23984-201ENSMUST00000157139 203 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm37917-201ENSMUST00000194711 392 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Gm5279-201ENSMUST00000199575 745 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4Q8BQZ5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4Q8BQZ5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms