Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm13689-201ENSMUST00000119360 685 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm11918-201ENSMUST00000121660 179 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm5745-201ENSMUST00000183748 313 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm28911-201ENSMUST00000188837 117 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.59□□□□□ -0.55
Srrm4Q8BKA3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Srrm4Q8BKA3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Srrm4Q8BKA3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Gm17330-201ENSMUST00000221047 165 ntBASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srrm4Q8BKA3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms