Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm15371-201ENSMUST00000117057 784 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm15429-201ENSMUST00000151268 798 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm23984-201ENSMUST00000157139 203 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm6180-201ENSMUST00000065243 498 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm26315-201ENSMUST00000083890 321 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4bQ8BGE6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4bQ8BGE6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4bQ8BGE6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4bQ8BGE6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4bQ8BGE6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm12091-201ENSMUST00000146791 830 ntBASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm6983-201ENSMUST00000214912 628 ntBASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4bQ8BGE6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Gm44397-201ENSMUST00000195950 113 ntBASIC12.57□□□□□ -0.4
Atg4bQ8BGE6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms