Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm27772-201ENSMUST00000184900 187 ntBASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.4■□□□□ 0.06
Prpf40bQ80W14 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40bQ80W14 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Prpf40bQ80W14 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm11793-201ENSMUST00000120433 981 ntBASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm24420-201ENSMUST00000176676 59 ntBASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Gm43133-201ENSMUST00000197472 463 ntBASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Prpf40bQ80W14 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Gm6152-201ENSMUST00000151704 340 ntBASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.38■□□□□ 0.05
Prpf40bQ80W14 Olfr284-202ENSMUST00000206647 966 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms