Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.34□□□□□ -0.27
Rpp38Q80UU2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpp38Q80UU2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm45384-201ENSMUST00000210451 277 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpp38Q80UU2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpp38Q80UU2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Gm14350-201ENSMUST00000116642 640 ntBASIC13.31□□□□□ -0.28
Rpp38Q80UU2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms