Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm9062-201ENSMUST00000117712 727 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm14109-201ENSMUST00000118814 309 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm18204-201ENSMUST00000209835 793 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm9111-201ENSMUST00000219394 709 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm14005-208ENSMUST00000223654 681 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm11930-201ENSMUST00000117788 190 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm37028-201ENSMUST00000194276 107 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm3793-201ENSMUST00000204973 672 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm45224-201ENSMUST00000208203 414 ntBASIC11.24□□□□□ -0.61
Rif1Q6PR54 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rif1Q6PR54 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm11637-201ENSMUST00000120601 592 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm5369-201ENSMUST00000217499 588 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm12218-201ENSMUST00000117666 399 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm14034-201ENSMUST00000120147 551 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm42511-201ENSMUST00000196160 234 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms