Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Gm9727-201ENSMUST00000161387 555 ntBASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Gm27920-201ENSMUST00000183953 96 ntBASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Gm44487-201ENSMUST00000205145 325 ntBASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf220Q6PDX6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm15427-201ENSMUST00000117288 531 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf220Q6PDX6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms