Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm3436-201ENSMUST00000179930 840 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm27430-201ENSMUST00000184585 107 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm44333-201ENSMUST00000197168 107 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcd3Q6P9Z1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm14701-201ENSMUST00000117156 348 ntBASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15770-201ENSMUST00000117498 584 ntBASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms