Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm13392-201ENSMUST00000117708 150 ntBASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm17420-201ENSMUST00000164753 153 ntBASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm42442-201ENSMUST00000197951 1133 ntBASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmgb4Q6P8W9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Gm37424-201ENSMUST00000191727 561 ntBASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Gm40466-201ENSMUST00000212174 422 ntBASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb4Q6P8W9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Snora78-201ENSMUST00000158630 128 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm29127-201ENSMUST00000188304 517 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm5161-201ENSMUST00000075243 853 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Gm10478-201ENSMUST00000084451 396 ntBASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hmgb4Q6P8W9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms