Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Phox2aQ62066 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Phox2aQ62066 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Phox2aQ62066 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.02□□□□□ -0.64
Phox2aQ62066 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.02□□□□□ -0.64
Phox2aQ62066 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Phox2aQ62066 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Phox2aQ62066 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.02□□□□□ -0.64
Phox2aQ62066 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.02□□□□□ -0.65
Phox2aQ62066 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Phox2aQ62066 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Phox2aQ62066 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Gm8749-201ENSMUST00000117737 331 ntBASIC11.01□□□□□ -0.65
Phox2aQ62066 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.01□□□□□ -0.65
Phox2aQ62066 Gm1401-201ENSMUST00000122048 772 ntBASIC11.01□□□□□ -0.65
Phox2aQ62066 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.01□□□□□ -0.65
Phox2aQ62066 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Phox2aQ62066 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.01□□□□□ -0.65
Phox2aQ62066 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Phox2aQ62066 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Phox2aQ62066 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms