Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm14350-201ENSMUST00000116642 640 ntBASIC15.74■□□□□ 0.11
Ctr9Q62018 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm13226-201ENSMUST00000117838 404 ntBASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm6447-201ENSMUST00000118905 835 ntBASIC15.74■□□□□ 0.11
Ctr9Q62018 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ctr9Q62018 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ctr9Q62018 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.73■□□□□ 0.11
Ctr9Q62018 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.73■□□□□ 0.11
Ctr9Q62018 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Gm43438-201ENSMUST00000198133 379 ntBASIC15.73■□□□□ 0.11
Ctr9Q62018 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.73■□□□□ 0.11
Ctr9Q62018 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.73■□□□□ 0.11
Ctr9Q62018 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ctr9Q62018 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ctr9Q62018 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ctr9Q62018 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ctr9Q62018 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm12203-201ENSMUST00000118235 598 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm12209-201ENSMUST00000120089 596 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm27331-201ENSMUST00000183705 60 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.72■□□□□ 0.11
Ctr9Q62018 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ctr9Q62018 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ctr9Q62018 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ctr9Q62018 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms