Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli3Q61602 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gli3Q61602 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gli3Q61602 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli3Q61602 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli3Q61602 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gli3Q61602 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gli3Q61602 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.52■□□□□ 0.39
Gli3Q61602 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Gm12218-201ENSMUST00000117666 399 ntBASIC17.52■□□□□ 0.39
Gli3Q61602 Gm16071-201ENSMUST00000119589 793 ntBASIC17.52■□□□□ 0.39
Gli3Q61602 Gm15595-201ENSMUST00000120840 961 ntBASIC17.52■□□□□ 0.39
Gli3Q61602 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Gli3Q61602 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.52■□□□□ 0.39
Gli3Q61602 Gm25604-201ENSMUST00000158359 133 ntBASIC17.52■□□□□ 0.39
Gli3Q61602 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Gm17826-201ENSMUST00000189720 798 ntBASIC17.52■□□□□ 0.39
Gli3Q61602 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC17.52■□□□□ 0.39
Gli3Q61602 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Gli3Q61602 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Gli3Q61602 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gli3Q61602 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli3Q61602 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.51■□□□□ 0.39
Gli3Q61602 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli3Q61602 Gm13315-201ENSMUST00000120376 991 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm12516-201ENSMUST00000120819 385 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm12291-201ENSMUST00000121627 311 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm13182-201ENSMUST00000122241 312 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm4726-201ENSMUST00000135604 736 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm6019-201ENSMUST00000148369 736 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC17.51■□□□□ 0.39
Gli3Q61602 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.51■□□□□ 0.39
Gli3Q61602 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.51■□□□□ 0.39
Gli3Q61602 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli3Q61602 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gli3Q61602 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli3Q61602 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gli3Q61602 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.5■□□□□ 0.39
Gli3Q61602 Gm19680-201ENSMUST00000095050 1513 ntBASIC17.5■□□□□ 0.39
Gli3Q61602 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gli3Q61602 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gli3Q61602 Mir8115-201ENSMUST00000184992 119 ntBASIC17.5■□□□□ 0.39
Gli3Q61602 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.5■□□□□ 0.39
Gli3Q61602 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.5■□□□□ 0.39
Gli3Q61602 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gli3Q61602 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gli3Q61602 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.5■□□□□ 0.39
Gli3Q61602 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli3Q61602 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Gm22133-201ENSMUST00000102082 109 ntBASIC17.49■□□□□ 0.39
Gli3Q61602 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Gli3Q61602 Gm43752-201ENSMUST00000198475 697 ntBASIC17.49■□□□□ 0.39
Gli3Q61602 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.49■□□□□ 0.39
Gli3Q61602 Gm18204-201ENSMUST00000209835 793 ntBASIC17.49■□□□□ 0.39
Gli3Q61602 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.49■□□□□ 0.39
Gli3Q61602 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli3Q61602 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
Gli3Q61602 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms