Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Gm13226-201ENSMUST00000117838 404 ntBASIC13.89□□□□□ -0.19
Smarcd1Q61466 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Gm45841-201ENSMUST00000207700 164 ntBASIC13.89□□□□□ -0.19
Smarcd1Q61466 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.89□□□□□ -0.19
Smarcd1Q61466 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Mir1982-201ENSMUST00000157368 74 ntBASIC13.88□□□□□ -0.19
Smarcd1Q61466 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm4271-201ENSMUST00000174444 973 ntBASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm45784-201ENSMUST00000188360 142 ntBASIC13.88□□□□□ -0.19
Smarcd1Q61466 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.88□□□□□ -0.19
Smarcd1Q61466 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd1Q61466 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms