Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.79□□□□□ -0.04
Ift88Q61371 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ift88Q61371 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.79□□□□□ -0.04
Ift88Q61371 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Mir7221-201ENSMUST00000184009 72 ntBASIC14.79□□□□□ -0.04
Ift88Q61371 Gm45841-201ENSMUST00000207700 164 ntBASIC14.79□□□□□ -0.04
Ift88Q61371 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ift88Q61371 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.79□□□□□ -0.04
Ift88Q61371 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.79□□□□□ -0.04
Ift88Q61371 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ift88Q61371 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ift88Q61371 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ift88Q61371 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
Ift88Q61371 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ift88Q61371 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.78□□□□□ -0.04
Ift88Q61371 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.78□□□□□ -0.04
Ift88Q61371 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm22175-201ENSMUST00000175007 78 ntBASIC14.78□□□□□ -0.04
Ift88Q61371 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm17330-201ENSMUST00000221047 165 ntBASIC14.78□□□□□ -0.04
Ift88Q61371 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.78□□□□□ -0.04
Ift88Q61371 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ift88Q61371 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ift88Q61371 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ift88Q61371 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ift88Q61371 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
Ift88Q61371 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ift88Q61371 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Ift88Q61371 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.77□□□□□ -0.05
Ift88Q61371 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.77□□□□□ -0.05
Ift88Q61371 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ift88Q61371 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
Ift88Q61371 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ift88Q61371 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ift88Q61371 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ift88Q61371 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ift88Q61371 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Ift88Q61371 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ift88Q61371 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ift88Q61371 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms