Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.85□□□□□ -0.35
Col12a1Q60847 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.85□□□□□ -0.35
Col12a1Q60847 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 Gm38092-201ENSMUST00000195600 653 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.85□□□□□ -0.35
Col12a1Q60847 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.85□□□□□ -0.35
Col12a1Q60847 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col12a1Q60847 Gm25072-201ENSMUST00000175233 235 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.85□□□□□ -0.35
Col12a1Q60847 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.85□□□□□ -0.35
Col12a1Q60847 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.85□□□□□ -0.35
Col12a1Q60847 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col12a1Q60847 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col12a1Q60847 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm14058-201ENSMUST00000116082 735 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm13937-201ENSMUST00000121000 988 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 Gm1821-202ENSMUST00000227415 750 ntBASIC12.84□□□□□ -0.35
Col12a1Q60847 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col12a1Q60847 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col12a1Q60847 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col12a1Q60847 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Col12a1Q60847 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Col12a1Q60847 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col12a1Q60847 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col12a1Q60847 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Col12a1Q60847 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.83□□□□□ -0.36
Col12a1Q60847 Gm13736-201ENSMUST00000119272 253 ntBASIC12.83□□□□□ -0.36
Col12a1Q60847 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.83□□□□□ -0.36
Col12a1Q60847 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col12a1Q60847 Acot6-202ENSMUST00000222921 3622 ntBASIC12.83□□□□□ -0.36
Col12a1Q60847 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col12a1Q60847 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.83□□□□□ -0.36
Col12a1Q60847 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.83□□□□□ -0.36
Col12a1Q60847 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.83□□□□□ -0.36
Col12a1Q60847 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms