Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rnf20Q5DTM8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Rnf20Q5DTM8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Gm15371-201ENSMUST00000117057 784 ntBASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Gm12341-201ENSMUST00000119724 503 ntBASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Mir7221-201ENSMUST00000184009 72 ntBASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Gm29608-201ENSMUST00000190444 463 ntBASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf20Q5DTM8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Gm7488-201ENSMUST00000117148 684 ntBASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf20Q5DTM8 Gm18307-201ENSMUST00000206864 949 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms