Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Urb1Q571H0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm37922-201ENSMUST00000195596 455 ntBASIC12.3□□□□□ -0.44
Urb1Q571H0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.3□□□□□ -0.44
Urb1Q571H0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.3□□□□□ -0.44
Urb1Q571H0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm5687-201ENSMUST00000118252 640 ntBASIC12.3□□□□□ -0.44
Urb1Q571H0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.3□□□□□ -0.44
Urb1Q571H0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Urb1Q571H0 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.3□□□□□ -0.44
Urb1Q571H0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.29□□□□□ -0.44
Urb1Q571H0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.29□□□□□ -0.44
Urb1Q571H0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Urb1Q571H0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.29□□□□□ -0.44
Urb1Q571H0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Urb1Q571H0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm4986-201ENSMUST00000119731 549 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm38144-201ENSMUST00000192790 465 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.28□□□□□ -0.44
Urb1Q571H0 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm16372-201ENSMUST00000073088 450 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.28□□□□□ -0.44
Urb1Q571H0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Urb1Q571H0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Urb1Q571H0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Urb1Q571H0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Urb1Q571H0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Urb1Q571H0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Urb1Q571H0 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.27□□□□□ -0.44
Urb1Q571H0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms