Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gm7809-201ENSMUST00000153199 742 ntBASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gm25668-201ENSMUST00000157700 129 ntBASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx49Q4FZF3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Gm8805-201ENSMUST00000117848 313 ntBASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Gm5363-201ENSMUST00000211927 938 ntBASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx49Q4FZF3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx49Q4FZF3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Gm8584-201ENSMUST00000171982 758 ntBASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Mospd4-201ENSMUST00000180618 576 ntBASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.51■□□□□ 0.07
Ddx49Q4FZF3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms