Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm37917-201ENSMUST00000194711 392 ntBASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Syne3Q4FZC9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne3Q4FZC9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Mir6392-201ENSMUST00000184924 108 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.17□□□□□ -0.14
Syne3Q4FZC9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms