Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm15823-201ENSMUST00000064305 670 ntBASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdkl5Q3UTQ8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Mir6392-201ENSMUST00000184924 108 ntBASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gm26315-201ENSMUST00000083890 321 ntBASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdkl5Q3UTQ8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Gm13689-201ENSMUST00000119360 685 ntBASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Cdkl5Q3UTQ8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdkl5Q3UTQ8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdkl5Q3UTQ8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdkl5Q3UTQ8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdkl5Q3UTQ8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Gm6983-201ENSMUST00000214912 628 ntBASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdkl5Q3UTQ8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms