Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Q3U1D9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.59□□□□□ -0.55
Q3U1D9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.59□□□□□ -0.55
Q3U1D9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.59□□□□□ -0.55
Q3U1D9 Gm13392-201ENSMUST00000117708 150 ntBASIC11.59□□□□□ -0.55
Q3U1D9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.59□□□□□ -0.55
Q3U1D9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.59□□□□□ -0.55
Q3U1D9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Q3U1D9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.59□□□□□ -0.55
Q3U1D9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.59□□□□□ -0.55
Q3U1D9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Q3U1D9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Q3U1D9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.59□□□□□ -0.55
Q3U1D9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.59□□□□□ -0.55
Q3U1D9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Q3U1D9 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.59□□□□□ -0.55
Q3U1D9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Q3U1D9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Q3U1D9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Q3U1D9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Q3U1D9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Q3U1D9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Gm14350-201ENSMUST00000116642 640 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Gm1335-201ENSMUST00000121653 386 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Gm37497-201ENSMUST00000195830 798 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.58□□□□□ -0.56
Q3U1D9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Q3U1D9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.58□□□□□ -0.56
Q3U1D9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Q3U1D9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.58□□□□□ -0.56
Q3U1D9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Q3U1D9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Q3U1D9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.57□□□□□ -0.56
Q3U1D9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Gm13369-201ENSMUST00000119442 987 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms