Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccbe1Q3MI99 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gm18246-201ENSMUST00000221023 728 ntBASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccbe1Q3MI99 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm15467-201ENSMUST00000120582 445 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm44719-201ENSMUST00000206404 149 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms