Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm26013-201ENSMUST00000104404 119 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm8756-201ENSMUST00000183250 929 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm18460-201ENSMUST00000208088 464 ntBASIC11.83□□□□□ -0.52
Chd8Q09XV5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd8Q09XV5 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm37201-201ENSMUST00000191845 523 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm5599-201ENSMUST00000209602 788 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm12516-201ENSMUST00000120819 385 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm29741-201ENSMUST00000192667 421 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm17831-201ENSMUST00000205579 900 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.82□□□□□ -0.52
Chd8Q09XV5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd8Q09XV5 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm12337-201ENSMUST00000119634 400 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm38092-201ENSMUST00000195600 653 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 BC106175-202ENSMUST00000219344 1213 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.81□□□□□ -0.52
Chd8Q09XV5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd8Q09XV5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms