Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm18041-201ENSMUST00000218210 618 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm27701-201ENSMUST00000184498 110 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.72□□□□□ -0.53
Thbs3Q05895 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm45841-201ENSMUST00000207700 164 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Thbs3Q05895 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.72□□□□□ -0.53
Thbs3Q05895 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs3Q05895 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.71□□□□□ -0.53
Thbs3Q05895 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms